0.0.0	Unknown function	0	Open reading frames	0.0	"Unknown proteins, no known homologs"
1.1.1	Chemotaxis and mobility	1	Cell processes	1.1	"Chemotaxis, motility"
1.2.1	Chromosome replication	1	Cell processes	1.2	Chromosome replication
1.3.1	Chaperones	1	Cell processes	1.3	Folding and ushering proteins
1.4.1	Cell killing	1	Cell processes	1.4	Protection responses
1.4.2	Detoxification	1	Cell processes	1.4	Protection responses
1.4.3	Drug/analog sensitivity	1	Cell processes	1.4	Protection responses
1.4.4	Radiation sensitivity	1	Cell processes	1.4	Protection responses
1.5.01	ABC superfamily (atp_bind)	1	Cell processes	1.5	Transport/binding proteins
1.5.02	ABC superfamily (membrane)	1	Cell processes	1.5	Transport/binding proteins
1.5.03	ABC superfamily (peri_perm)	1	Cell processes	1.5	Transport/binding proteins
1.5.42	APC family of transport protein	1	Cell processes	1.5	Transport/binding proteins
1.5.43	ArAAP family	1	Cell processes	1.5	Transport/binding proteins
1.5.04	Ars family	1	Cell processes	1.5	Transport/binding proteins
1.5.05	BCCT superfamily	1	Cell processes	1.5	Transport/binding proteins
1.5.06	CDF family	1	Cell processes	1.5	Transport/binding proteins
1.5.07	CNT family	1	Cell processes	1.5	Transport/binding proteins
1.5.08	CPA1 family	1	Cell processes	1.5	Transport/binding proteins
1.5.09	CPA2 family	1	Cell processes	1.5	Transport/binding proteins
1.5.10	DAACS family	1	Cell processes	1.5	Transport/binding proteins
1.5.11	DASS family	1	Cell processes	1.5	Transport/binding proteins
1.5.12	Dcu family	1	Cell processes	1.5	Transport/binding proteins
1.5.13	DcuC	1	Cell processes	1.5	Transport/binding proteins
1.5.14	FNT family	1	Cell processes	1.5	Transport/binding proteins
1.5.15	FeoB family	1	Cell processes	1.5	Transport/binding proteins
1.5.16	GPH family	1	Cell processes	1.5	Transport/binding proteins
1.5.17	General PTS family	1	Cell processes	1.5	Transport/binding proteins
1.5.18	GltS family	1	Cell processes	1.5	Transport/binding proteins
1.5.19	GntP family	1	Cell processes	1.5	Transport/binding proteins
1.5.20	MATE family	1	Cell processes	1.5	Transport/binding proteins
1.5.21	MFS family	1	Cell processes	1.5	Transport/binding proteins
1.5.22	MIP family	1	Cell processes	1.5	Transport/binding proteins
1.5.23	Mechanism not stated	1	Cell processes	1.5	Transport/binding proteins
1.5.24	Membrane-bound ATP synthase	1	Cell processes	1.5	Transport/binding proteins
1.5.25	NCS1 family	1	Cell processes	1.5	Transport/binding proteins
1.5.26	NCS2 family	1	Cell processes	1.5	Transport/binding proteins
1.5.27	NhaA family	1	Cell processes	1.5	Transport/binding proteins
1.5.28	NhaB family	1	Cell processes	1.5	Transport/binding proteins
1.5.29	Outer membrane channel	1	Cell processes	1.5	Transport/binding proteins
1.5.30	P-type ATPase family	1	Cell processes	1.5	Transport/binding proteins
1.5.31	POT family	1	Cell processes	1.5	Transport/binding proteins
1.5.32	PiT family	1	Cell processes	1.5	Transport/binding proteins
1.5.33	RNDfamily	1	Cell processes	1.5	Transport/binding proteins
1.5.34	SMR family	1	Cell processes	1.5	Transport/binding proteins
1.5.35	SSS family	1	Cell processes	1.5	Transport/binding proteins
1.5.36	STP family	1	Cell processes	1.5	Transport/binding proteins
1.5.37	Sugar-specific PTS system	1	Cell processes	1.5	Transport/binding proteins
1.5.38	SulP family	1	Cell processes	1.5	Transport/binding proteins
1.5.39	Trk system	1	Cell processes	1.5	Transport/binding proteins
1.5.40	Uptake of DNA	1	Cell processes	1.5	Transport/binding proteins
1.5.41	VIC family	1	Cell processes	1.5	Transport/binding proteins
1.6.1	"Adaptations, atypical conditions"	1	Cell processes	1.6	Adaptation
1.6.2	Osmotic adaptation	1	Cell processes	1.6	Adaptation
1.7.1	Cell division	1	Cell processes	1.7	Cell division
2.1.1	Degradation of DNA	2	Macromolecule metabolism	2.1	Macromolecule degradation
2.1.2	Degradation of RNA	2	Macromolecule metabolism	2.1	Macromolecule degradation
2.1.3	Degradation of polysaccharides	2	Macromolecule metabolism	2.1	Macromolecule degradation
2.1.4	"Degradation of proteins, peptides, glyco"	2	Macromolecule metabolism	2.1	Macromolecule degradation
2.2.01	Amino acyl tRNA syn; tRNA modific'n	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.02	"Basic proteins - synthesis, modification"	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.03	"DNA - replication, repair, restr./modific'n"	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.04	Glycoprotein	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.05	Lipopolysaccharide	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.06	Lipoprotein	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.07	Phospholipids	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.08	Polysaccharides - (cytoplasmic)	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.09	Protein modufication	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.10	Proteins - translation and modification	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.11	"RNA synthesis, modification, DNA transcript'n"	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
2.2.12	tRNA	2	Macromolecule metabolism	2.2	"Macromolecule synthesis, modification"
3.1.01	Alanine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.02	Arginine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.03	Asparagine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.04	Aspartate	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.05	Chorismate	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.06	Cysteine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.07	Glutamate	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.08	Glutamine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.09	Glycine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.10	Histidine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.11	Isoleucine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.12	Leucine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.13	Lysine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.14	Methionine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.15	Phenylalanine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.16	Proline	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.17	Serine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.18	Threonine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.19	Tryptophan	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.20	Tyrosine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.1.21	Valine	3	Metabolism of small molecules	3.1	Amino acid biosynthesis
3.2.01	Acyl carrier protein (ACP)	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.02	Biotin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.03	Cobalamin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.04	Enterochelin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.05	Folic acid	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.06	"Heme, porphyrin"	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.07	Lipoate	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.08	"Menaquinone, ubiquinone"	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.09	Molybdopterin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.10	Pantothenate	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.11	Pyridine nucleotide	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.12	Pyridoxine	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.13	Riboflavin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.14	Thiamin	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.15	"Thioredoxin, glutaredoxin, glutathione"	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.2.16	biotin carboxyl carrier protein (BCCP)	3	Metabolism of small molecules	3.2	"Biosynthesis of cofactors, carriers"
3.3.01	2'-Deoxyribonucleotide metabolism	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.02	Amino sugars	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.03	Entner-Douderoff	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.04	Gluconeogenesis	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.05	Glyoxylate bypass	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.06	Incorporation metal ions	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.07	Misc. glucose metabolism	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.08	Misc. glycerol metabolism	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.09	"Non-oxidative branch, pentose  pwy"	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.10	Nucleotide hydrolysis	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.11	Nucleotide interconversions	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.12	Oligosaccharides	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.13	Phosphorus compounds	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.14	Polyamine biosynthesis	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.15	"Pool, multipurpose conversions of intermed. met'm"	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.16	S-adenosyl methionine	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.17	Salvage of nucleosides and nucleotides	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.18	"Sugar-nucleotide biosynthesis, conversions"	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.19	Sulfur metabolism	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.20	amino acids	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.3.00	other	3	Metabolism of small molecules	3.3	Central intermediary metabolism
3.4.1	Amines	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.4.2	Amino acids	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.4.3	Carbon compounds	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.4.4	Fatty acids	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.4.5	Other	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.4.0	ATP-proton motive force interconversion	3	Metabolism of small molecules	3.4	Degradation of small molecules
3.5.1	Aerobic respiration	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.2	Anaerobic respiration	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.3	Electron transport	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.4	Fermentation	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.5	Glycolysis	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.6	"Oxidative branch, pentose pwy"	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.7	Pyruvate dehydrogenase	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.5.8	TCA cycle	3	Metabolism of small molecules	3.5	"Energy metabolism, carbon"
3.6.1	Fatty acid and phosphatidic acid  biosynth	3	Metabolism of small molecules	3.6	Fatty acid biosynthesis
3.7.1	Purine ribonucleotide biosynthesis	3	Metabolism of small molecules	3.7	Nucleotide biosynthesis
3.7.2	Pyrimidine ribonucleotide biosynthesis	3	Metabolism of small molecules	3.7	Nucleotide biosynthesis
4.1.1	Inner membrane	4	Structural elements	4.1	Cell envelop
4.1.2	"Murein sacculus, peptidoglycan"	4	Structural elements	4.1	Cell envelop
4.1.3	Outer  membrane constituents	4	Structural elements	4.1	Cell envelop
4.1.4	Surface polysaccharides & antigens	4	Structural elements	4.1	Cell envelop
4.1.5	Surface structures	4	Structural elements	4.1	Cell envelop
4.2.1	Ribosomal and stable RNAs	4	Structural elements	4.2	Ribosome constituents
4.2.2	"Ribosomal proteins - synthesis, modificationRiboso"	4	Structural elements	4.2	Ribosome constituents
4.2.3	Ribosomes - maturation and modification	4	Structural elements	4.2	Ribosome constituents
5.1.1	Colicin-related functions	5	Extrachromosomal	5.1	Laterally acquirred elements
5.1.2	Phage-related functions and prophages	5	Extrachromosomal	5.1	Laterally acquirred elements
5.1.3	Plasmid-related functions	5	Extrachromosomal	5.1	Laterally acquirred elements
5.1.4	Transposon-related functions	5	Extrachromosomal	5.1	Laterally acquirred elements
6.1.1	Global regulatory functions	6	Global functions	6.1	Global regulatory functions
7.1.1	"DNA sites, no gene product"	7	Miscellaneous	7.1	DNA sites
7.0.0	Not classified (included putative assignments)	7	Miscellaneous	7.0	"Some information, but not classifiable"
7.2.1	Cryptic genes	7	Miscellaneous	7.2	Unexpressed functions